CDS

Accession Number TCMCG057C03866
gbkey CDS
Protein Id XP_018458828.1
Location complement(join(25420885..25420945,25421020..25421081,25421178..25421246,25421351..25421398,25421467..25421526,25421613..25421725,25421817..25421889,25421972..25422016,25422089..25422202,25422459..25422743))
Gene LOC108829697
GeneID 108829697
Organism Raphanus sativus

Protein

Length 309aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018603326.1
Definition PREDICTED: polyadenylate-binding protein-interacting protein 8-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category H
Description RNA binding
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03019        [VIEW IN KEGG]
ko03041        [VIEW IN KEGG]
KEGG_ko ko:K13126        [VIEW IN KEGG]
ko:K13186        [VIEW IN KEGG]
ko:K13195        [VIEW IN KEGG]
EC -
KEGG_Pathway ko03013        [VIEW IN KEGG]
ko03015        [VIEW IN KEGG]
ko03018        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
map03015        [VIEW IN KEGG]
map03018        [VIEW IN KEGG]
GOs GO:0001558        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003727        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0003730        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005654        [VIEW IN EMBL-EBI]
GO:0005730        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006417        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006950        [VIEW IN EMBL-EBI]
GO:0006996        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008187        [VIEW IN EMBL-EBI]
GO:0008266        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009266        [VIEW IN EMBL-EBI]
GO:0009314        [VIEW IN EMBL-EBI]
GO:0009409        [VIEW IN EMBL-EBI]
GO:0009411        [VIEW IN EMBL-EBI]
GO:0009416        [VIEW IN EMBL-EBI]
GO:0009628        [VIEW IN EMBL-EBI]
GO:0009889        [VIEW IN EMBL-EBI]
GO:0009890        [VIEW IN EMBL-EBI]
GO:0009891        [VIEW IN EMBL-EBI]
GO:0009892        [VIEW IN EMBL-EBI]
GO:0009893        [VIEW IN EMBL-EBI]
GO:0009894        [VIEW IN EMBL-EBI]
GO:0009895        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010033        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0010468        [VIEW IN EMBL-EBI]
GO:0010494        [VIEW IN EMBL-EBI]
GO:0010556        [VIEW IN EMBL-EBI]
GO:0010557        [VIEW IN EMBL-EBI]
GO:0010558        [VIEW IN EMBL-EBI]
GO:0010564        [VIEW IN EMBL-EBI]
GO:0010604        [VIEW IN EMBL-EBI]
GO:0010605        [VIEW IN EMBL-EBI]
GO:0010608        [VIEW IN EMBL-EBI]
GO:0010628        [VIEW IN EMBL-EBI]
GO:0010629        [VIEW IN EMBL-EBI]
GO:0014070        [VIEW IN EMBL-EBI]
GO:0016043        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016441        [VIEW IN EMBL-EBI]
GO:0016458        [VIEW IN EMBL-EBI]
GO:0016604        [VIEW IN EMBL-EBI]
GO:0016607        [VIEW IN EMBL-EBI]
GO:0017148        [VIEW IN EMBL-EBI]
GO:0019219        [VIEW IN EMBL-EBI]
GO:0019222        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019843        [VIEW IN EMBL-EBI]
GO:0022607        [VIEW IN EMBL-EBI]
GO:0022613        [VIEW IN EMBL-EBI]
GO:0022618        [VIEW IN EMBL-EBI]
GO:0030308        [VIEW IN EMBL-EBI]
GO:0030371        [VIEW IN EMBL-EBI]
GO:0030425        [VIEW IN EMBL-EBI]
GO:0031047        [VIEW IN EMBL-EBI]
GO:0031050        [VIEW IN EMBL-EBI]
GO:0031323        [VIEW IN EMBL-EBI]
GO:0031324        [VIEW IN EMBL-EBI]
GO:0031325        [VIEW IN EMBL-EBI]
GO:0031326        [VIEW IN EMBL-EBI]
GO:0031327        [VIEW IN EMBL-EBI]
GO:0031328        [VIEW IN EMBL-EBI]
GO:0031329        [VIEW IN EMBL-EBI]
GO:0031330        [VIEW IN EMBL-EBI]
GO:0031974        [VIEW IN EMBL-EBI]
GO:0031981        [VIEW IN EMBL-EBI]
GO:0032268        [VIEW IN EMBL-EBI]
GO:0032269        [VIEW IN EMBL-EBI]
GO:0032270        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0033554        [VIEW IN EMBL-EBI]
GO:0034063        [VIEW IN EMBL-EBI]
GO:0034248        [VIEW IN EMBL-EBI]
GO:0034249        [VIEW IN EMBL-EBI]
GO:0034250        [VIEW IN EMBL-EBI]
GO:0034622        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0035194        [VIEW IN EMBL-EBI]
GO:0035195        [VIEW IN EMBL-EBI]
GO:0035196        [VIEW IN EMBL-EBI]
GO:0035770        [VIEW IN EMBL-EBI]
GO:0036464        [VIEW IN EMBL-EBI]
GO:0036477        [VIEW IN EMBL-EBI]
GO:0040008        [VIEW IN EMBL-EBI]
GO:0040029        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042995        [VIEW IN EMBL-EBI]
GO:0043005        [VIEW IN EMBL-EBI]
GO:0043021        [VIEW IN EMBL-EBI]
GO:0043023        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043228        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043232        [VIEW IN EMBL-EBI]
GO:0043233        [VIEW IN EMBL-EBI]
GO:0043331        [VIEW IN EMBL-EBI]
GO:0043487        [VIEW IN EMBL-EBI]
GO:0043488        [VIEW IN EMBL-EBI]
GO:0043489        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0043933        [VIEW IN EMBL-EBI]
GO:0044085        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044451        [VIEW IN EMBL-EBI]
GO:0044463        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0044877        [VIEW IN EMBL-EBI]
GO:0045182        [VIEW IN EMBL-EBI]
GO:0045727        [VIEW IN EMBL-EBI]
GO:0045926        [VIEW IN EMBL-EBI]
GO:0045934        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048255        [VIEW IN EMBL-EBI]
GO:0048518        [VIEW IN EMBL-EBI]
GO:0048519        [VIEW IN EMBL-EBI]
GO:0048522        [VIEW IN EMBL-EBI]
GO:0048523        [VIEW IN EMBL-EBI]
GO:0050789        [VIEW IN EMBL-EBI]
GO:0050794        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051128        [VIEW IN EMBL-EBI]
GO:0051171        [VIEW IN EMBL-EBI]
GO:0051172        [VIEW IN EMBL-EBI]
GO:0051173        [VIEW IN EMBL-EBI]
GO:0051246        [VIEW IN EMBL-EBI]
GO:0051247        [VIEW IN EMBL-EBI]
GO:0051248        [VIEW IN EMBL-EBI]
GO:0051252        [VIEW IN EMBL-EBI]
GO:0051253        [VIEW IN EMBL-EBI]
GO:0051716        [VIEW IN EMBL-EBI]
GO:0051726        [VIEW IN EMBL-EBI]
GO:0060255        [VIEW IN EMBL-EBI]
GO:0061013        [VIEW IN EMBL-EBI]
GO:0065003        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070013        [VIEW IN EMBL-EBI]
GO:0070181        [VIEW IN EMBL-EBI]
GO:0070417        [VIEW IN EMBL-EBI]
GO:0070887        [VIEW IN EMBL-EBI]
GO:0070918        [VIEW IN EMBL-EBI]
GO:0070925        [VIEW IN EMBL-EBI]
GO:0071310        [VIEW IN EMBL-EBI]
GO:0071359        [VIEW IN EMBL-EBI]
GO:0071407        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071826        [VIEW IN EMBL-EBI]
GO:0071840        [VIEW IN EMBL-EBI]
GO:0080090        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:0097447        [VIEW IN EMBL-EBI]
GO:0097458        [VIEW IN EMBL-EBI]
GO:0120025        [VIEW IN EMBL-EBI]
GO:0120038        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901698        [VIEW IN EMBL-EBI]
GO:1901699        [VIEW IN EMBL-EBI]
GO:1901987        [VIEW IN EMBL-EBI]
GO:1902369        [VIEW IN EMBL-EBI]
GO:1902373        [VIEW IN EMBL-EBI]
GO:1902806        [VIEW IN EMBL-EBI]
GO:1903311        [VIEW IN EMBL-EBI]
GO:1903312        [VIEW IN EMBL-EBI]
GO:1990904        [VIEW IN EMBL-EBI]
GO:2000112        [VIEW IN EMBL-EBI]
GO:2000113        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCCGCGATCACTGAGACCCTAGTCACTGATGATGTTGGTGAGGGAATTGAGAAGAAGAGCTTGGTGACGACTGATTCTAAACCGGAATCTGAATCCAAACCTGAACCGGAGTCTGATCAAATGAAGAAGCTGGAGGCTTTGTTCAAGAAACTGAACCCTGAAGCTAAAGAGTTTATCCCTTCTTACAAGAAGCATTATCAGTCTCTGTCTTCTGATGATTTTGCCATCACTACTAAGAAGCAATCTAGTGGTGAAGAATTCAACAAAAAAGATGGCTGCAAGAGAAGAAACGATTATAACCAAGGGAGGAAAGTTAGGTTAGCTGGAAGAGCTTACAAGGCTCAAAGAGAGGATAGTATTAGAAGAACAGTCTATGTCTCCGACATTGATCAGACTGTGACTGAGGAAGTCTTAGCTGGATTGTTCAGCAGCTATGGACAAGTTGTTGATTGTCGTATCTGTGGAGATCCACATTCAGTTCTTCGCTTTGCGTTTGTTGAGTTCTCTGATGACCAAGGTGCAAGAGCTGCTTTAAGTGTGGGTGGAACAGTTATCGGTTATCACCCGGTTAGAGTCTTGCCTTCAAAGACAGCTATTCTTCCAGTGAATCCCACATTTCTCCCCAGGTCAGAAGATGAAAGGGAGAAGTGTACAAGAACCATCTACTGCACTAATGTCGACAAGAATGCCACTGAAGATGATGTCAGAACCTTCTTTGAGTCTGCCTGGGGTGAGGTTACTCGCATAAGGCTTCTTGGCGATCAGTTGCATTCTACTCGCATAGCTTTTTTTGAATTTGCCGTGGCAGAGAGTGCAGTTGCAGCACTCAACTGCAGCGGAGTAGTCTTAGGATCTCAGCCGATAAGGGTAAGTCCTTCAAAGACACCAGTGAGATCAGGATTCACTCGATCACCATCCACAAACTAG
Protein:  
MAAITETLVTDDVGEGIEKKSLVTTDSKPESESKPEPESDQMKKLEALFKKLNPEAKEFIPSYKKHYQSLSSDDFAITTKKQSSGEEFNKKDGCKRRNDYNQGRKVRLAGRAYKAQREDSIRRTVYVSDIDQTVTEEVLAGLFSSYGQVVDCRICGDPHSVLRFAFVEFSDDQGARAALSVGGTVIGYHPVRVLPSKTAILPVNPTFLPRSEDEREKCTRTIYCTNVDKNATEDDVRTFFESAWGEVTRIRLLGDQLHSTRIAFFEFAVAESAVAALNCSGVVLGSQPIRVSPSKTPVRSGFTRSPSTN